Publications

1. Ivshina I.B. Kuyukina M.S. Krivoruchko A.V.
   Draft genome sequence of propane- and butane-oxidizing Rhodococcus ruber IEGM 333 able to accumulate cesium // Microbiology Resource Announcements. 2024. e00101-24. DOI: 10.1128/mra.00101-24.
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2. Shmagel K.V. Saidakova E.V. Korolevskaya L.B. Vlasova V.V. Younes S-A.
   Activated/Cycling Treg Deficiency and Mitochondrial Alterations in Immunological Non-Responders to Antiretroviral Therapy // Frontiers in Bioscience Landmark. 2024.

3. Maltseva P.Y. Plotnitskaya (Luchnikova) N.A. Krivoruchko A.V. Beletskiy A.V. Rakitin A.L. Mardanov A.V. Ivshina I.B.
   Article bioinformatics analysis of the genome of Rhodococcus rhodochrous IEGM 1362, an (−)-isopulegol biotransformer // Genes. 2024. V. 15. No. 8. Article 992. DOI: 10.3390/genes15080992.
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4. Saidakova E.V. Shmagel K.V. Sieg S. Hunt P.
   Editorial: Immunological non-responders in HIV infection // Front. Immunol. 2024. V.15. P. 1487565.

5. Ivshina I.B. Kuyukina M.S. Krivoruchko A.V.
   Extremotolerant Rhodococcus as an important resource for environmental biotechnology // Actinomycetes in extreme and marine environments: An unexhausted source for microbial biotechnology. Science Publishers, CRC Press: Boca Raton, 2024. Ed. by I. Kurtböke. P. 209−246. ISBN 978-0-367-25280-9 DOI: 10.1201/9780429293948.

6. Krivoruchko A.V. Kuyukina M.S. Peshkur T.A. Cunningham C.J. Ivshina I.B.
   Rhodococcus strains from the Specialized Collection of Alkanotrophs for biodegradation of aromatic compounds // Molecules. 2023. V. 28. Article 2393. DOI: 10.3390/molecules28052393.

7. Vlasova V.V. Korolevskaya L.B. Loginova O.A. Shmagel N.G. Saidakova E.V.
   Functional exhaustion of CD4+ T cells in HIV/HCV coinfected HAART-treated patients // Meditsinskaya Immunologiya. 2023. V.25. N. 4. P. 837-844.

8. Saidakova E.V. Korolevskaya L.B. Shmagel N.G. Vlasova V.V. Shardina K.Yu. Chereshnev V.A. Shmagel K.V.
   In HIV-infected immunological non-responders, hepatitis C virus eradication contributes to incomplete normalization of systemic inflammation, but does not lead to rapid CD4+ T-cell count recovery // Doklady Biochemistry and Biophysics. 2023. V. 512. P. 454-459.

9. Korolevskaya L.B. Saidakova E.V. Shmagel N.G. Shmagel K.V.
   In HIV-infected patients, intestinal bacteria-derived products interfere with CD4+ T cell regeneration // Meditsinskaya Immunologiya. 2023. V.25. N. 4. P. 845-850.

10. Lazarev S. Uzhviyuk S. Rayev M.B. Timganova V.P. Bochkova M.S. Khaziakhmatova O. Malashchenko V. Litvinova L. Zamorina S.A.
    Interaction of Graphene Oxide Nanoparticles with Human Mesenchymal Stem Cells Visualized in the Cell-IQ System // Molecules. 2023. 23. P. 4148 https://doi.org/10.3390/molecules28104148.
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11. Saidakova E.V. Korolevskaya L.B. Shmagel K.V.
    Memory CD4+ T-cells in HIV-Infected Immunological Nonresponders are Prone to Apoptosis when Cycling // Lecture Notes in Networks and Systems. 2023. P. 437-443.

12. Vlasova V.V. Shmagel K.V.
    T Lymphocyte Metabolic Features and Techniques to Modulate Them // Biochemistry (Moscow). 2023. V.88. N.11. P. 1857-1873.

13. Zamorina S.A. Timganova V.P. Bochkova M.S. Shardina K. Uzhviyuk S. Khramtsov P.V. Usanina Rayev M.B. D.
    The Effect of PEGylated Graphene Oxide Nanoparticles on the Th17-Polarization of Activated T Helpers // Materials. 2023. 16. P. 877 https://doi.org/10.3390/ma16020877.
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14. Khramtsov P.V. Kropaneva M.D. Bochkova M.S. Timganova V.P. Kiselkov D. Zamorina S.A. Rayev M.B.
    Synthesis and Application of Albumin Nanoparticles Loaded with Prussian Blue Nanozymes // Colloids and Interfaces. 2022. V. 6, I. 2. P. 29.
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15. Khramtsov P.V. Kropaneva M.D. Minin A.S. Bochkova M.S. Timganova V.P. Maximov A. Puzik A. Zamorina S.A. Rayev M.B.
    Prussian Blue Nanozymes with Enhanced Catalytic Activity: Size Tuning and Application in ELISA-like Immunoassay // Nanomaterials. 2022. V. 12, I.10. P. 1630.
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16. Khramtsov P.V. Bochkova M.S. Timganova V.P. Kiselkov D. Zamorina S.A. Rayev M.B.
    Albumin Nanoparticles Loaded with Hemin as Peroxidase Mimics for Immunoassay // ChemistrySelect. 2022. V. 7, I. 3.. P. e202103892.
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17. Ivshina I.B. Krivoruchko A.V. Kuyukina M.S. Peshkur T.A. Cunningham C.J.
    Adhesion of Rhodococcus bacteria to solid hydrocarbons // Scientific Reports. 2022. V. 12. Article 21559. DOI: 10.1038/s41598-022-26173-3.

18. Korolevskaya L.B. Saidakova E.V. Shmagel N.G. Shmagel K.V.
    Assessment of the Mitochondrial Condition in CD4+ and CD8+ T-Lymphocytes from Healthy Subjects // Cell and Tissue Biology. 2022. V. 16, N. 5. P. 470-477.

19. Ivshina I.B. Tyumina E.A. Bazhutin G.A. Polygalov M.A. Krivoruchko A.V.
    Draft genome sequence of a ketoprofen degrader Rhodococcus erythropolis IEGM 746 // Microbiology Resource Announcements. 2022. Article e01070-22. DOI:10.1128/MRA.01070-22.
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20. B. Ferrari A.C. Da Silva K.H. Liu Saidakova E.V. Korolevskaya L.B. Shmagel K.V. C. Shive G.P. Sanchez M. Retuerto A.A. Sharma K. Ghneim L. Noel-Romas B. Rodriguez M.A. Ghannoum P.P. Hunt S.G. Deeks A.D. Burgener D.P. Jones M.A. Dobre V.C
    Gut-derived bacterial toxins impair memory CD4+ T cell mitochondrial function in HIV-1 infection // J. Clin. Invest. 2022. V. 132, N. 9. P. e149571.